ParvoDB ID PV023696 GenBank Accession JX027214
Subfamily Parvovirinae Genus Erythroparvovirus
Species Erythroparvovirus primate1 Sequence Length 2016
Definition Human parvovirus B19 isolate B19V D1 non-structural protein 1 gene, complete cds. Submission Date 2012-05-07
Strain Name B19V D1 Sampling Date 2009-01
Sampling Country Germany Location Leica Microsystems, Wetzlar, Germany
Submitted By Zobel,T. Submitting Institution Med. Clinic II Cardiology and Pneumology, Charite University Medicine Berlin-CBF, Hindenburgdamm 30, Berlin 12200, Germany
Original Host Homo sapiens Sample Type endomyocardial biopsy sample
Standardized Host Name Homo sapiens Host Tax Rank species
Standardized Host Class Mammalia Standardized Host Order Primates
Environmental Origin - N/A - Reagent Origin - N/A -
Number Reagent/Consumables Purpose PMID/Url Reference
1 Peripheral blood mononuclear cells (PBMCs) To investigate the presence of B19V DNA and mRNA in different cell fractions. 25805750 View Related Publication
2 CD34+KDR+ cells Magnetically sorted cell fraction to quantify B19V DNA and to investigate viral replication.
3 CD34+ cells Isolate hematopoietic progenitor cells for comparison with CD34+KDR+ and CD34- cells.
4 CD34- cells Isolate lineage-committed cell fraction for comparison with CD34+KDR+ and CD34+ cells.
5 Early outgrowth EPC (eo-EPC) Cultivated from bone marrow and blood to quantify numbers and investigate B19V DNA presence.
6 Endothelial Colony-Forming Cells (ECFC) To analyze the infectibility and B19V gene expression after in vitro infection.
7 Colony Forming Unit-Hill (CFU-Hill) colonies Cultivated to study their infectibility and changes after B19V infection.
8 Erythroblastoid cell line UT7/Epo-S1 Used as a comparison for in vitro infectibility with B19V.
9 Quantitative PCR To quantify B19V DNA from sorted cell fractions and endomyocardial biopsy samples.
10 In situ hybridization To prove the intracellular presence of B19V after infection in vitro.
11 RT-PCR To detect B19V gene transcripts (NS1, VP1/VP2, 11kDa) in infected CAC.
12 FACS analysis To analyze receptor and coreceptor expression on CAC and to quantify apoptotic markers like active caspase-3 and annexin V.
13 Annexin V To identify apoptotic cells post B19V infection.
14 Caspase-3 antibody To detect active caspase-3 in apoptotic CAC after B19V infection.
15 TUNEL assay To detect terminal apoptosis in B19V-infected CAC.
16 EVCB (EndoCult Liquid Medium Kit) To cultivate CFU-Hill colonies.
17 Evans Blue To quantify reendothelialization in a murine carotid artery injury model.
18 Class I Human Leukocyte Antigen (HLA-I) To detect human eo-EPC in murine carotid arteries post-transplantation.
19 Anti-mouse CD117-APC and CD309-PE antibodies To quantify endogenous murine progenitors by FACS analysis post carotid injury.