Panoramic Parvovirus Strain Discovery Data Chain
| ParvoDB ID | PV020984 | GenBank Accession | MF595992 |
| Subfamily | Parvovirinae | Genus | Bocaparvovirus |
| Species | Bocaparvovirus primate1 | Sequence Length | 339 |
| Definition | Human bocavirus 1 isolate TyT11_11_1 VP1 gene, partial cds. | Submission Date | 2017-08-01 |
| Strain Name | TyT11_11_1 | Sampling Date | 2011-11 |
| Sampling Country | Uruguay | Location | TreintayTres, Uruguay |
| Submitted By | Salvo,M., Lizasoain,A., Castells,M., Bortagaray,V., Colina,R., Lopez Tort,F. and Victoria,M. | Submitting Institution | Laboratorio de Virologia Molecular, Cenur Litoral Norte Sede Salto, Rivera 1350, Salto, Salto 50000, Uruguay |
| Original Host | None | Sample Type | sewage samples,surface water samples |
| Standardized Host Name | Homo sapiens | Host Tax Rank | species |
| Standardized Host Class | Mammalia | Standardized Host Order | Primates |
| Environmental Origin | - N/A - | Reagent Origin | - N/A - |
| Number | Reagent/Consumables | Purpose | PMID/Url | Reference |
|---|---|---|---|---|
| 1 | Sewage samples | Collected to study HBoV in various cities. | 29299861 | View Related Publication |
| 2 | Surface water samples | Collected monthly for analysis of HBoV presence. | ||
| 3 | QIAmp Cador Pathogen mini kit (QIAGEN, Hilden, Germany) | Nucleic acid extraction according to manufacturer’s instructions. | ||
| 4 | SensiFastTM II Probe Kit (Bioline Reagents Ltd.) | Used for qPCR reactions. | ||
| 5 | Rotor-Gene Q instrument (QIAGEN, Hilden, Germany) | qPCR instrument for screening and quantification of HBoV. | ||
| 6 | PureLink Quick Gel Extraction and PCR Purification Combo kit (Invitrogen, Carlsbad, California, United States) | Purification of PCR amplicons. |