Panoramic Parvovirus Strain Discovery Data Chain
| ParvoDB ID | PV018303 | GenBank Accession | MG550917 |
| Subfamily | Parvovirinae | Genus | Protoparvovirus |
| Species | Protoparvovirus primate1 | Sequence Length | 183 |
| Definition | Bufavirus-3 isolate ETH_P16_2016 VP1 gene, partial cds. | Submission Date | 2017-11-20 |
| Strain Name | ETH_P16_2016 | Sampling Date | 2016-04 |
| Sampling Country | Ethiopia | Location | Ethiopia |
| Submitted By | Altan,E. and Delwart,E. | Submitting Institution | Molecular Virology, Blood Systems Research Institute, 270 Masonic Ave, San Francisco, CA 94118, USA |
| Original Host | Homo sapiens | Sample Type | Fecal samples |
| Standardized Host Name | Homo sapiens | Host Tax Rank | species |
| Standardized Host Class | Mammalia | Standardized Host Order | Primates |
| Environmental Origin | - N/A - | Reagent Origin | - N/A - |
| Number | Reagent/Consumables | Purpose | PMID/Url | Reference |
|---|---|---|---|---|
| 1 | 0.45-μm filter (Millipore) | Filtering the supernatants to remove larger particles. | 30114205 | View Related Publication |
| 2 | Mixture of nuclease enzymes | Digesting nucleic acids that are not protected by viral capsids. | ||
| 3 | Maxwell 16 automated extractor (Promega) | Extracting viral nucleic acids from the digested filtrates. | ||
| 4 | NexteraXT Sample Preparation Kit (Illumina) | Generating a library for Illumina MiSeq sequencing. |