Panoramic Parvovirus Strain Discovery Data Chain
| ParvoDB ID | PV017943 | GenBank Accession | KF483157 |
| Subfamily | Parvovirinae | Genus | Bocaparvovirus |
| Species | Bocaparvovirus primate1 | Sequence Length | 417 |
| Definition | Human bocavirus isolate PAKNIH-RGH2243 viral protein 1 (VP1) gene, partial cds. | Submission Date | 2013-07-31 |
| Strain Name | PAKNIH-RGH2243 | Sampling Date | 2008 |
| Sampling Country | Pakistan | Location | Rawalpindi General Hospital, Pakistan, Pakistan |
| Submitted By | Alam,M.M., Khurshid,A., Shaukat,S., Rana,M.S., Sharif,S., Angez,M. and Zaidi,S.S.Z. | Submitting Institution | Virology, National Institute of Health-Pakistan, Park Road, Chak Shahzad, Islamabad, Islamabad 44000, Pakistan |
| Original Host | Homo sapiens | Sample Type | stool samples |
| Standardized Host Name | Homo sapiens | Host Tax Rank | species |
| Standardized Host Class | Mammalia | Standardized Host Order | Primates |
| Environmental Origin | - N/A - | Reagent Origin | - N/A - |
| Number | Reagent/Consumables | Purpose | PMID/Url | Reference |
|---|---|---|---|---|
| 1 | Phosphate Buffered Saline (PBS) | To create a 10% suspension of fecal samples for rotavirus detection. | 25611467 | View Related Publication |
| 2 | ProSpecTTM Rotavirus Microplate Assay (Oxoid Ltd., Basingstoke Hants, UK) | For ELISA testing of human rotavirus antigen in fecal supernatants. | ||
| 3 | Qiagen DNA blood kit (Qiagen Inc., Valencia, CA) | For extraction of viral DNA from 10% fecal suspensions for HBoV testing. | ||
| 4 | Big Dye Terminator Cycle Sequencing Reaction Kit v3.1 (Applied Biosystems) | For direct sequencing of amplified PCR products in phylogenetic analysis. |