Panoramic Parvovirus Strain Discovery Data Chain
| ParvoDB ID | PV017624 | GenBank Accession | KU360110 |
| Subfamily | Parvovirinae | Genus | Bocaparvovirus |
| Species | Bocaparvovirus primate1 | Sequence Length | 410 |
| Definition | Human bocavirus 1 isolate EG-BSU/CRC-22 coat protein VP1 gene, partial cds. | Submission Date | 2015-12-27 |
| Strain Name | EG-BSU/CRC-22 | Sampling Date | 2012-11-23 |
| Sampling Country | Egypt | Location | Egypt |
| Submitted By | Abdel-Moneim,A.S., El-Fol,H.A., Kamel,M.M., Soliman,A.S.A., Mahdi,E.A., El-Gammal,A.S. and Mahran,T.Z.M. | Submitting Institution | Microbiology, Virology Division, College of Medicine, Taif University, Al-Haweyia, Al-Taif 21944, Saudi Arabia |
| Original Host | Homo sapiens | Sample Type | cancer tissue specimens |
| Standardized Host Name | Homo sapiens | Host Tax Rank | species |
| Standardized Host Class | Mammalia | Standardized Host Order | Primates |
| Environmental Origin | - N/A - | Reagent Origin | - N/A - |
| Number | Reagent/Consumables | Purpose | PMID/Url | Reference |
|---|---|---|---|---|
| 1 | Hematoxylin | Staining pathological sections of cancer specimens. | 27155943 | View Related Publication |
| 2 | Eosin | Counterstaining pathological sections of cancer specimens. | ||
| 3 | gSYNCTM DNA Extraction Kit (Geneaid Biotech Ltd., Taiwan) | DNA extraction from tissue sections. | ||
| 4 | Xylene | Deparaffinization of tissue sections. | ||
| 5 | 100% Ethanol | Deparaffinization of tissue sections and evaporation process. | ||
| 6 | 0.1% SDS | Component of the DNA extraction buffer. | ||
| 7 | 10 mM EDTA | Component of the DNA extraction buffer. | ||
| 8 | Proteinase K (62.5 mg/ml) | Component of the DNA extraction buffer for digesting proteins. | ||
| 9 | PCR Mastermix (Solis Bio-Dyne, Inc., Estonia) | Polymerase chain reaction (PCR) amplification. | ||
| 10 | Gel Extraction Kit (Koma Bioteck, Inc., Seoul, Korea) | Purification of positive PCR amplicons. |