Panoramic Parvovirus Strain Discovery Data Chain
| ParvoDB ID | PV014377 | GenBank Accession | MT023357 |
| Subfamily | Parvovirinae | Genus | Bocaparvovirus |
| Species | Bocaparvovirus primate2 | Sequence Length | 480 |
| Definition | Human bocavirus 2 isolate AGE71_14 structural protein VP1 gene, partial cds. | Submission Date | 2020-02-04 |
| Strain Name | AGE71_14 | Sampling Date | from 2013-09 to 2015-06 |
| Sampling Country | China | Location | MacKay Memorial Hospital, China |
| Submitted By | Lin,M.Y.-C., Chan,H.-C., Lin,J.-H. and Liu,H.-F. | Submitting Institution | Mackay Memorial Hospital, Department of Medical Research, No. 45, Minsheng Rd., Tamsui District, New Taipei City 25160, Taiwan |
| Original Host | Homo sapiens | Sample Type | stool samples |
| Standardized Host Name | Homo sapiens | Host Tax Rank | species |
| Standardized Host Class | Mammalia | Standardized Host Order | Primates |
| Environmental Origin | - N/A - | Reagent Origin | - N/A - |
| Number | Reagent/Consumables | Purpose | PMID/Url | Reference |
|---|---|---|---|---|
| 1 | QIAamp DNA Mini Kit (Qiagen, CA) | Extraction of viral DNA from stool suspension samples | 32046345 | View Related Publication |
| 2 | PCR primers | First-round and second-round for nested PCR targeting the VP1/2 region | ||
| 3 | TaKaRa premix Taq DNA polymerase (TaKaRa Bio INC) | PCR amplification | ||
| 4 | QIAquick PCR purification kits (Qiagen, CA) | Purification of positive PCR products | ||
| 5 | BigDye Terminator v3.1 cycle sequencing kit reagents (Applied Biosystems) | Direct sequencing of purified PCR products |