Panoramic Parvovirus Strain Discovery Data Chain

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ParvoDB ID PV013447 GenBank Accession MG779500
Subfamily Parvovirinae Genus Erythroparvovirus
Species Erythroparvovirus primate1 Sequence Length 855
Definition Erythroparvovirus primate1 isolate B19V/Sankt-Petersburg.RUS/15.2015/1 non-structural protein 1 (NS1) and minor capsid protein 1 (VP1) genes, partial cds. Submission Date 2018-01-10
Strain Name B19V/Sankt-Petersburg.RUS/15.2015/1 Sampling Date 2015-04-07
Sampling Country Russia Location St.Petersburg, Russia, Russia
Submitted By Nikishov,O.N., Antipova,A.Y., Khamitova,I.V., Ostankova,Y.V., Lavrentieva,I.N. and Kuzin,A.A. Submitting Institution Laboratory of Experimental Virology, St.-Petersburg Pasteur Institute, Street Mira, 14, Saint-Petersburg, Saint-Petersburg 197101, Russia
Original Host Homo sapiens Sample Type Plasma sample
Standardized Host Name Homo sapiens Host Tax Rank species
Standardized Host Class Mammalia Standardized Host Order Primates
Environmental Origin - N/A - Reagent Origin - N/A -
Number Reagent/Consumables Purpose PMID/Url Reference
1 Blood samples from blood donors of Saint Petersburg Study the prevalence of antibodies to parvovirus B19 and the activity of the circulation of this virus 33533216 View Related Publication
2 recomWELLParvovirus B19 IgM To determine virus-specific antibodies of class IgM using the ELISA method
3 recomWELLParvovirus B19 IgG To determine virus-specific antibodies of class IgG using the ELISA method
4 Amplisens Parvovirus B19-FL To determine the presence of parvovirus B19 DNA and viral load using PCR method
5 Formamide For denaturing the purified precipitate before sequencing
6 ABI PRISM BigDyeTerminator v3.1 (Applied Biosystems, USA) To conduct sequencing reactions
7 ABI Prism 3500 genetic analyzer (Applied Biosystems, USA) To analyze the sequenced products