Panoramic Parvovirus Strain Discovery Data Chain
| ParvoDB ID | PV010667 | GenBank Accession | AB481080 |
| Subfamily | Parvovirinae | Genus | Bocaparvovirus |
| Species | Bocaparvovirus primate1 | Sequence Length | 5299 |
| Definition | Human bocavirus DNA, complete genome, strain: JPOC07-511. | Submission Date | 2009-02-13 |
| Strain Name | JPOC07-511 | Sampling Date | from 2006-04 to 2008-10 |
| Sampling Country | Japan | Location | Osaka City, Japan, Japan |
| Submitted By | Kaida,A. | Submitting Institution | Contact:Atsushi Kaida Osaka City Institute of Public Health and Environmental Sciences, Microbiology; 8-34, Tojo-cho, Tennoji-ku, Osaka, Osaka 543-0026, Japan |
| Original Host | Homo sapiens | Sample Type | Clinical specimens |
| Standardized Host Name | Homo sapiens | Host Tax Rank | species |
| Standardized Host Class | Mammalia | Standardized Host Order | Primates |
| Environmental Origin | - N/A - | Reagent Origin | - N/A - |
| Number | Reagent/Consumables | Purpose | PMID/Url | Reference |
|---|---|---|---|---|
| 1 | QIAamp Viral RNA Mini Kit (Qiagen, Valencia, CA, USA) | Extraction of viral nucleic acids from the specimens. | 20536724 | View Related Publication |
| 2 | TaqMan Universal PCR Master Mix (Applied Biosystems, Foster City, CA, USA) | For the real-time PCR method for HBoV NP-1 gene. | ||
| 3 | Oligonucleotide primer pairs and TaqMan probe (Sigma-Aldrich, Tokyo, Japan) | Designed for the real-time PCR detection of HBoV NP-1 gene. | ||
| 4 | MEM supplemented with 1% FBS | Maintenance of Vero and RD-18S cells for virus isolation tests. | ||
| 5 | MEM supplemented with 1% FBS and 1% trypsin | Culture of MDCK cells for virus isolation, particularly for FLU virus infection. |