ParvoDB ID PV007483 GenBank Accession MT709014
Subfamily Parvovirinae Genus Dependoparvovirus
Species Dependoparvovirus primate1 Sequence Length 4429
Definition Adeno-associated virus isolate hu.Lvr07 Rep (rep) and Cap (cap) genes, complete cds. Submission Date 2020-07-02
Strain Name hu.Lvr07 Sampling Date 2017
Sampling Country Australia Location Australia
Submitted By Hallwirth,C.V. Submitting Institution Gene Therapy Research Unit, Children's Medical Research Institute, 214 Hawkesbury Road, Westmead, NSW 2145, Australia
Original Host Homo sapiens Sample Type liver samples
Standardized Host Name Homo sapiens Host Tax Rank species
Standardized Host Class Mammalia Standardized Host Order Primates
Environmental Origin - N/A - Reagent Origin - N/A -
Number Reagent/Consumables Purpose PMID/Url Reference
1 Primary human liver samples Source of naturally hepatotropic AAV variants 32908003 View Related Publication
2 HuH-7 cells Cell line used for testing AAV transduction and replication
3 Human adenovirus 5 (hAd5) Co-infection with RC-AAV to support AAV replication
4 Fah//Rag2//Il2rg/ (FRG) mice with humanized livers In vivo model for testing AAV tropism and transduction efficiency
5 ssAAV-LSP1-GFP-BC-WPRE-BGHpA Barcoded vector used for transduction efficiency assays
6 Heparin Used in competition assays to infer HSPG-binding affinity
7 Immunohistochemical reagents (antibodies for human GAPDH, GFP, and DAPI) Visualization and quantification of hepatocyte transduction in liver sections
8 QIAamp Fast DNA Tissue Kit DNA extraction from human liver tissues
9 Multiplex polymerase chain reaction (PCR) primers Amplification of AAV capsid and rep genes from isolated DNA
10 SYBR Green qPCR Quantification of AAV genomes during replication studies
11 Isotonic Percoll Separation of live and dead cells during single-cell suspension preparation
12 Phycoerythrin-conjugated anti-human-HLA-ABC, biotin-conjugated anti-mouse-H2Kb, allophycocyanin-conjugated streptavidin Flow cytometry reagents for differentiating human and mouse hepatocytes
13 Iodixanol AAV purification via gradient ultracentrifugation
14 HiTrap Heparin HP column Heparin affinity chromatography to evaluate AAV capsid interaction