ParvoDB ID PV003682 GenBank Accession NC_001829
Subfamily Parvovirinae Genus Dependoparvovirus
Species Dependoparvovirus primate1 Sequence Length 4767
Definition Adeno-associated virus - 4, complete genome. Submission Date 1997-02-17
Strain Name ATCC VR-646 Sampling Date
Sampling Country None Location None
Submitted By Chiorini,J.A., Yang,L., Kotin,R.M. and Safer,B. Submitting Institution MHB, NHLBI,NIH, Bld 10/7D18 10 Center Dr. MSC1654, Bethesda, MD 20982-1654, USA
Original Host None Sample Type None
Standardized Host Name Homo sapiens Host Tax Rank species
Standardized Host Class Mammalia Standardized Host Order Primates
Environmental Origin - N/A - Reagent Origin - N/A -
Number Reagent/Consumables Purpose PMID/Url Reference
1 D10 medium (Dulbecco’s modified Eagle’s medium containing 10% fetal calf serum, 100 U of penicillin per ml, 100 mg of streptomycin per ml, and 13 amphotericin B) Maintenance of Cos and HeLa cell monolayer cultures 9261407 View Related Publication
2 AAV4 stocks (American Type Culture Collection, no. VR-646) Source of AAV4 for virus propagation
3 Helper plasmid (modified to remove homologous sequence) Minimization of wild-type AAV particle formation during recombinant virus production
4 DNA sequence (ABI 373A automated sequencer, FS dye terminator chemistry) DNA sequencing
5 PCR (Deep Vent Polymerase, New England Biolabs) Cloning of ITR
6 XbaI and EcoRI Restriction digestion post-PCR
7 Agarose gel electrophoresis Purification of the amplified DNA band
8 Bluescript SKII+ (Stratagene) Cloning vector for recovered DNA fragment
9 Competent Sure strain bacteria (Stratagene) Transformation for plasmid propagation
10 Pfu polymerase (Stratagene) PCR for producing helper plasmid
11 Simian virus 40 origin of replication containing plasmid Helper plasmid construction for recombinant virus production
12 B-galactosidase reporter vector Reporter gene for transduction efficiency analysis
13 Human erythrocytes (RBC) (type O) Hemagglutination (HA) assay
14 EDTA-buffered saline Dilution buffer for virus in HA assay
15 5-bromo-4-chloro-3-indolyl-β-D-galactopyranoside (X-Gal) (ICN Biomedicals) Staining for β-galactosidase activity
16 Trypsin–0.02% EDTA solution (Biofluids) Trypsinization of cells before transduction