Panoramic Parvovirus Strain Discovery Data Chain
| ParvoDB ID | PV003657 | GenBank Accession | GU048664 |
| Subfamily | Parvovirinae | Genus | Bocaparvovirus |
| Species | Bocaparvovirus primate2 | Sequence Length | 5173 |
| Definition | Human bocavirus 2 strain CU1557UK, complete genome. | Submission Date | 2009-09-30 |
| Strain Name | CU1557UK | Sampling Date | 2008-07 |
| Sampling Country | United Kingdom | Location | Edinburgh, United Kingdom |
| Submitted By | Chieochansin,T., Simmonds,P. and Poovorawan,Y. | Submitting Institution | Pediatrics, Faculty of Medicine, Center of Excellence in Clinical Virology, Chulalongkron University and Hospital, Bangkok 10330, Thailand |
| Original Host | Homo sapiens | Sample Type | fecal sample |
| Standardized Host Name | Homo sapiens | Host Tax Rank | species |
| Standardized Host Class | Mammalia | Standardized Host Order | Primates |
| Environmental Origin | - N/A - | Reagent Origin | - N/A - |
| Number | Reagent/Consumables | Purpose | PMID/Url | Reference |
|---|---|---|---|---|
| 1 | GoTaq Buffer (Promega, WI) | Used as part of the PCR amplification mixture. | 20686798 | View Related Publication |
| 2 | dNTP (Promega, WI) | Used as part of the PCR amplification mixture to provide the nucleotides required for DNA synthesis. | ||
| 3 | Forward Primer | Used in the semi-nested PCR for amplification of the target DNA sequence. | ||
| 4 | Reverse Primer | Used in the semi-nested PCR for amplification of the target DNA sequence. | ||
| 5 | GoTaq DNA Polymerase (Promega, WI) | Used as part of the PCR amplification mixture to catalyze the synthesis of DNA. | ||
| 6 | DNA Template | Used as the target DNA in the first-round PCR. | ||
| 7 | Nuclease-free Water | Used to dilute the PCR mixture to the final volume in the second-round PCR. | ||
| 8 | BigDye 3.0 (ABI, CA) | Used for sequencing the PCR amplification products. |