ParvoDB ID PV003075 GenBank Accession AY695376
Subfamily Parvovirinae Genus Dependoparvovirus
Species Dependoparvovirus primate1 Sequence Length 4430
Definition Adeno-associated virus isolate hu.S17 Rep78 protein and capsid protein VP1 (cap) genes, complete cds. Submission Date 2004-07-23
Strain Name hu.S17 Sampling Date 2005-11-15
Sampling Country United States of America Location Columbus, United States of America
Submitted By Chen,C.L., Jensen,R.L., Schnepp,B.C., Connell,M.J., Bartlett,J.S., Sferra,T.J., Shell,R., Johnson,P.R. and Clark,K.R. Submitting Institution Center for Gene Therapy, Children's Research Institute, 700 Children's Drive, Columbus, OH 43205, USA
Original Host Homo sapiens Sample Type tissues
Standardized Host Name Homo sapiens Host Tax Rank species
Standardized Host Class Mammalia Standardized Host Order Primates
Environmental Origin - N/A - Reagent Origin - N/A -
Number Reagent/Consumables Purpose PMID/Url Reference
1 Dulbecco’s modified Eagle's medium Cultured A459 cells for adenovirus isolation. 16282478 View Related Publication
2 Fetal calf serum Supplemented cell culture medium for adenovirus isolation.
3 Digestion buffer (10 mM Tris, pH 8; 100 mM NaCl; 0.5% sodium dodecyl sulfate; 25 mM EDTA) supplemented with 2 mg/ml proteinase K For DNA isolation from human tissue samples.
4 Phenol-chloroform/isoamyl alcohol (25:24:1) For DNA extraction.
5 DNase-free RNase A (QIAGEN Inc.) To remove RNA from DNA samples.
6 [α-32P]dCTP Labeled hybridization probe for in-gel Southern blot hybridization.
7 SureStart Taq polymerase (Stratagene) For PCR amplification.
8 TOPO TA cloning kit (Invitrogen, Inc.) Cloning PCR products into vectors for sequencing.
9 BigDye terminator chemistry For sequencing DNA clones.
10 Horseradish peroxidase-linked sheep anti-human immunoglobulin G (Sigma Chemical Co.) For detecting human antibodies in ELISA.
11 5-bromo-4-chloro-3-indolyl-beta-D-galactopyranoside (X-Gal) Substrate for staining rAAV/β-gal infected cells.
12 Taqman PCR master mix For quantitative PCR analysis.
13 POROS HE-20 heparin column To assess the heparin-binding capacity of AAV capsids.
14 Sheep anti-human immunoglobulin G Secondary antibody for ELISA.
15 o-phenylenediamine dihydrochloride (Sigma) Substrate for colorimetric detection in ELISA.