Panoramic Parvovirus Strain Discovery Data Chain
| ParvoDB ID | PV001128 | GenBank Accession | JN183928 |
| Subfamily | Parvovirinae | Genus | Tetraparvovirus |
| Species | Tetraparvovirus primate1 | Sequence Length | 2483 |
| Definition | Human parvovirus 4 isolate GhanaF1 nonstructural protein and structural protein genes, partial cds. | Submission Date | 2011-06-27 |
| Strain Name | GhanaF1 | Sampling Date | 2009 |
| Sampling Country | Ghana | Location | the Presbyterian Hospital in Agogo, Ghana , Ghana |
| Submitted By | Eis-Hubinger,A.M., Reber,U., Drexler,J.F. and Drosten,C. | Submitting Institution | Institute of Virology, University of Bonn Medical Centre, Sigmund-Freud-Str. 25, Bonn 53105, Germany |
| Original Host | Homo sapiens | Sample Type | nasal samples and fecal samples |
| Standardized Host Name | Homo sapiens | Host Tax Rank | species |
| Standardized Host Class | Mammalia | Standardized Host Order | Primates |
| Environmental Origin | - N/A - | Reagent Origin | - N/A - |
| Number | Reagent/Consumables | Purpose | PMID/Url | Reference |
|---|---|---|---|---|
| 1 | RNAlater (QIAGEN, Hilden, Germany) | To stabilize nasal swab specimens. | 23018024 | View Related Publication |
| 2 | Phosphate-buffered saline | To prepare 10% suspensions of fecal samples. | ||
| 3 | QIAamp Viral RNA Kit (QIAGEN) | For viral DNA purification from nasal swab suspension. | ||
| 4 | DNA Stool Mini Kit (QIAGEN) | For viral DNA purification from fecal suspension. | ||
| 5 | Primer/probe set for PARV4 genotypes 1 or 2 | To detect PARV4 genotypes 1 or 2 viruses in real-time PCR. | ||
| 6 | Primer set for PARV4 genotype 3 | To detect PARV4 genotype 3 viruses in real-time PCR. | ||
| 7 | Genotype 3 plasmid standards | For absolute quantification of PARV4 genome copy numbers. |